Machine Learning Pipeline Infrastructure: The Hidden Bottlenecks Costing Startups

IO.NET Team
Jun 23, 2025
Machine Learning Pipeline Infrastructure: The Hidden Bottlenecks Costing Startups

Despite $7 trillion in planned investment in compute by 2030, only 22% of AI initiatives will successfully deploy. This is down from an already dismal 32% in 2023. 

So, why exactly is this happening? 

It’s not poor data or algorithmic complexity.  Instead, bottlenecks in the current machine learning pipeline infrastructure are draining budgets and derailing the productivity of projects. 

Let’s explore the fundamentals of machine learning pipelines to better equip developers to avoid these limitations.

What is a Machine Learning Pipeline? 

The simple answer is that machine learning pipelines are the automated sequences of data processing, model training, validation, and deployment steps performed by AI applications. Essentially, they encompass the entire workflow process of machine learning, which begins with raw data and culminates in production-ready AI models.While they are currently very inefficient at automating these sequences, they can be fixed and successfully deployed at scale over the next five years.  

Why Machine Learning Pipelines Fail at Scale

Large, centralized cloud computing providers have i do, dominated compute infrastructure in recent years. They are currently attempting to create large moats of accessibility by acquiring massive quantities of enterprise-grade GPUs, which they can then lease back out to AI projects at predatory pricing rates.

This attempt at monopolization has created three critical bottlenecks across the broader machine learning pipeline infrastructure. The first and most glaring issue is that the centralized model has GPU underutilization rates of around 60%. AI startups are paying overperformance pricing for underdelivering due to the underperformance when their GPUs sit idle during training gaps. This drains their budgets and reduces the critical runway they need to get to market. 

Network latency is also a critical bottleneck, as it compounds during distributed training, particularly for large language models requiring synchronous gradient updates across hundreds of GPUs. The third but by no means least significant bottleneck is that AI apps incur costs with centralized cloud providers that can scale unpredictably. Projects often receive preferential treatment during their pilot phase, but experience vastly different pricing when they reach production volumes.

Compounding these three issues are aggressive vendor lock-in contracts. Platform-specific implementations, such as Azure Machine Learning pipeline services, create dependencies on providers that prevent optimization. Similarly, when AWS spot instances aren't available, teams can't seamlessly shift to alternatives.

Pipeline Architecture Breakdown

The key to solving pipeline inefficiencies lies in understanding how the pipelines function on a fundamental level. 

Core Pipeline Stages

Identifying bottlenecks is easy, as core pipeline stages follow a predictable sequence across machine learning applications.. They typically start with data ingestion, then transition to feature engineering and model training, followed by validation and final deployment. Each stage has different computational requirements and profiles, so navigating the compute requirements between stages requires nuance. 

For instance, data processing benefits more from high-memory instances, while training models require a larger number of GPU clusters, and inference requires low-latency infrastructure.

Identifying Bottlenecks

Most pipeline bottlenecks occur at these layer intersections when there is a shift in computational demands. An increase in data transfer between storage and compute often puts a strain on pipeline throughput compared to when it is being used in a raw computational capacity. Poor orchestration and load management can lead to scheduling conflicts and delays when multiple experiments compete for a limited number of GPUs on the centralized network.

Infrastructure Optimization Opportunities

Better GPU allocation efficiency is the single most important way of helping to overcome bottlenecks. Machine learning training jobs require an intense amount of GPU usage for short periods, which then become idle during data loading. Multi-cloud elasticity — native to decentralization — can fix this issue by introducing more agile and dynamic responding infrastructure stacks. 

This is where decentralized platforms like io.net excel against centralized providers. Vendor lock-ins do not restrict decentralized alternatives to a single provider of GPUs. Instead, they can utilize container orchestration APIs, such as Kubernetes, to abstract away the complexity and offer easy navigation between GPU providers. This automates the process,allowing projects to scale as training demands change dynamically.

Framework Familiarity and Workflow Portability

Framework compatibility and enabling the seamless transition of GPU training infrastructure are key benefits for projects looking to migrate to decentralized infrastructure. Fortunately, leading orchestration tools, including TensorFlow TFX, Apache Airflow, and Kubeflow, naturally integrate with io.net’s decentralized infrastructure through standardized APIs. This familiarity enables teams to maintain their existing workflows, avoiding downtime and disruption during the transition.

Leveraging decentralized infrastructure allows projects to have real-time elasticity for their GPU compute. Instead of waiting for cloud providers to become available or being locked into paying expensive prices for idle GPUs, pipelines can automatically distribute their workloads across a network of globally distributed providers based entirely on their cost, latency, and project performance requirements.

Performance Benchmarks and Use Cases

The benefits of decentralized architecture for machine learning pipelines are not just theoretical. If we look at Leonardo.ai, we see a prime example of a real-world case study that is already reaping the rewards of switching to a new pipeline. By partnering with io.net’s infrastructure, Leonardo.ai was able to instantly access 24x A100 and 80x L40S enterprise-grade NVIDIA GPUs. This would have taken months and cost 90% more with centralized providers, according to Chris Gillis, co-founder of Leonardo.ai.

When looking at internal benchmarks, the difference is clear. GPU Utilization Metrics from io.net benchmarks reveal hidden waste in traditional cloud deployments. On the other hand, Centralized providers average 40-45% GPU utilization while io.net's decentralized infrastructure achieves 85-90% utilization through intelligent workload distribution.

Third-party research also illustrates the distinction between centralized and decentralized providers within machine learning pipelines. The production inference latency between AWS-us-east-1 baseline and io.net’s infrastructure revealed that io.net workloads showed a 51% lower median latency. 

Competitive Landscape

Cloud providers can offer services similar to those of decentralized alternatives — but they don’t. Nearly all providers are too blinded by vendor lock-in premiums that promote their own tech stack, which creates bloat in costs and limits access to projects. For example, IBM Watson integrates closely with IBM Cloud infra, but does so at premium pricing and limited geographic distribution.Similarly, one of the largest competitors but worst offenders of a limited tech stack, forced limitations, and vendor lock-ins is Google’s TensorFlow Extended (TFX). It offers comprehensive pipeline orchestration but requires the use of Google Cloud Platform Infrastructure, creating project dependency on Google Cloud Platform’s pricing and availability constraints.

DataRobot is another competitor that excels at automated machine learning workflows. Unfortunately, it still has self-imposed limitations by relying entirely on AWS/Azure backend infrastructure without cost-optimization strategies in place.

Key Takeaways 

By now, you should have a firm grasp of machine learning pipeline infrastructure, how it works, its current inefficiencies, and how decentralized alternatives can alleviate pain points, reduce costs, and eliminate vendor lock-ins.

The most important initial step a project can take before engaging with pipeline providers is to benchmark its current infrastructure utilization, hidden costs, and performance bottlenecks, ensuring a thorough understanding before committing to production deployments. Prioritizing vendor-neutral tools like Airflow and Kubeflow that integrate seamlessly across providers will also enable projects and developers to optimize costs and avoid platform lock-in.

io.net’s Edge

io.net’s competitive edge over centralized providers is its infrastructure-first optimization approach. While traditional providers add 300-500% markup over bare hardware costs, io.net infrastructure provides direct access to distributed GPUs at 60-90% cost savings. Geographic distribution across 130+ countries eliminates regional bottlenecks that constrain AWS, Google Cloud, and Azure deployments, and vendor-neutral architecture enables seamless migration between compute sources based on real-time cost and performance optimization.

The bottlenecks that exist within centralized machine learning pipelines, combined with the continual development of infrastructure that prioritizes gatekeeping access to workflows behind native tech stacks, are crushing innovation. If the status quo is maintained, then the expected 22% successful deployment rate by 2030 is sure to become a reality or worse.

Fortunately, machine learning pipelines offer more than simple access to enterprise-grade GPUs. Decentralized pipelines, like those offered through io.net, provide a viable alternative that can alleviate pain points and offer machine learning infrastructure at a fraction of the cost.